Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN1O15353 AC005695.3-201ENST00000614522 232 ntBASIC18.81■□□□□ 0.6
FOXN1O15353 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
FOXN1O15353 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
FOXN1O15353 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 AC007950.2-201ENST00000615045 2347 ntBASIC18.81■□□□□ 0.6
FOXN1O15353 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
FOXN1O15353 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 AL513523.2-202ENST00000427283 2040 ntBASIC18.81■□□□□ 0.6
FOXN1O15353 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN1O15353 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 PAUPAR-201ENST00000630360 2965 ntBASIC18.81■□□□□ 0.6
FOXN1O15353 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN1O15353 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXN1O15353 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXN1O15353 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXN1O15353 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXN1O15353 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXN1O15353 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXN1O15353 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXN1O15353 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.8■□□□□ 0.6
FOXN1O15353 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.8■□□□□ 0.6
FOXN1O15353 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXN1O15353 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXN1O15353 AP006547.1-201ENST00000563435 692 ntBASIC18.8■□□□□ 0.6
FOXN1O15353 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXN1O15353 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
FOXN1O15353 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
FOXN1O15353 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXN1O15353 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXN1O15353 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.79■□□□□ 0.6
FOXN1O15353 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXN1O15353 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.79■□□□□ 0.6
FOXN1O15353 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXN1O15353 MAGEA5-201ENST00000446757 942 ntBASIC18.79■□□□□ 0.6
FOXN1O15353 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.79■□□□□ 0.6
FOXN1O15353 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.79■□□□□ 0.6
FOXN1O15353 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 AC018635.2-201ENST00000608625 364 ntBASIC18.79■□□□□ 0.6
FOXN1O15353 AC091812.3-201ENST00000621362 345 ntBASIC18.79■□□□□ 0.6
FOXN1O15353 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXN1O15353 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXN1O15353 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXN1O15353 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXN1O15353 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXN1O15353 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FOXN1O15353 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXN1O15353 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms