Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDH17O14917 AL592424.1-201ENST00000563624 1536 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDH17O14917 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDH17O14917 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH17O14917 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 FO393414.2-201ENST00000405153 598 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH17O14917 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 RPL37AP1-201ENST00000412502 279 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 AC009477.1-201ENST00000452936 217 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDH17O14917 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDH17O14917 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDH17O14917 AC012645.4-201ENST00000610691 1061 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
PCDH17O14917 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 MIR6069-201ENST00000620069 79 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 AC008761.3-201ENST00000624803 892 ntBASIC15.13■□□□□ 0.01
PCDH17O14917 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH17O14917 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDH17O14917 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDH17O14917 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDH17O14917 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDH17O14917 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 PPT1-215ENST00000641471 2368 ntBASIC15.12■□□□□ 0.01
PCDH17O14917 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDH17O14917 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 MIR648-201ENST00000385046 94 ntBASIC15.12■□□□□ 0.01
PCDH17O14917 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDH17O14917 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH17O14917 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 RN7SL618P-201ENST00000477850 296 ntBASIC15.12■□□□□ 0.01
PCDH17O14917 AC005225.4-201ENST00000557330 545 ntBASIC15.12■□□□□ 0.01
PCDH17O14917 LINC02560-201ENST00000596379 459 ntBASIC15.12■□□□□ 0.01
PCDH17O14917 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH17O14917 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDH17O14917 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDH17O14917 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms