Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 COL6A4P2-202ENST00000504443 2753 ntBASIC15.15■□□□□ 0.02
PDLIM1O00151 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
PDLIM1O00151 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDLIM1O00151 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.15■□□□□ 0.02
PDLIM1O00151 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PDLIM1O00151 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.14■□□□□ 0.01
PDLIM1O00151 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 PTCHD3P3-201ENST00000403073 906 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 AP000347.1-202ENST00000435868 847 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 AC087163.2-201ENST00000457299 853 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 RPS15P9-201ENST00000494093 319 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 RNA5SP415-201ENST00000517246 115 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 IGHV3-65-201ENST00000523210 341 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 UNC93B6-202ENST00000528242 690 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.14■□□□□ 0.01
PDLIM1O00151 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 AC008667.4-201ENST00000607370 168 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 AC005593.1-201ENST00000624894 515 ntBASIC15.14■□□□□ 0.01
PDLIM1O00151 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.14■□□□□ 0.01
PDLIM1O00151 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.14■□□□□ 0.01
PDLIM1O00151 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PDLIM1O00151 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PDLIM1O00151 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.14■□□□□ 0.01
PDLIM1O00151 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.14■□□□□ 0.01
PDLIM1O00151 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PDLIM1O00151 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM1O00151 C18orf15-201ENST00000623680 2534 ntBASIC15.13■□□□□ 0.01
PDLIM1O00151 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PDLIM1O00151 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.13■□□□□ 0.01
PDLIM1O00151 AL022342.1-201ENST00000400363 863 ntBASIC15.13■□□□□ 0.01
PDLIM1O00151 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM1O00151 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 RPL13AP23-201ENST00000480739 586 ntBASIC15.13■□□□□ 0.01
PDLIM1O00151 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM1O00151 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM1O00151 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM1O00151 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.13■□□□□ 0.01
PDLIM1O00151 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.13■□□□□ 0.01
PDLIM1O00151 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PDLIM1O00151 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.13■□□□□ 0.01
PDLIM1O00151 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PDLIM1O00151 AC099521.3-201ENST00000624251 2938 ntBASIC15.13■□□□□ 0.01
PDLIM1O00151 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.12■□□□□ 0.01
PDLIM1O00151 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PDLIM1O00151 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.12■□□□□ 0.01
PDLIM1O00151 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms