Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 FO393414.2-201ENST00000405153 598 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AL589987.1-201ENST00000453380 819 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 RN7SL752P-201ENST00000463779 287 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 TIMM17BP1-201ENST00000545713 516 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC023310.3-201ENST00000557027 670 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC100756.1-201ENST00000562736 682 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC138749.3-201ENST00000567691 622 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AC116165.1-201ENST00000611806 668 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 SLC7A15P-201ENST00000424028 1363 ntBASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPA2E9PIF3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 MEP1AP4-201ENST00000423244 1087 ntBASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AC243562.2-201ENST00000561247 970 ntBASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 WASH4P-201ENST00000564273 1246 ntBASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms