Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC002056.1-201ENST00000395613 760 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AC004987.2-201ENST00000395959 1148 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AC105233.2-201ENST00000523697 349 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AF228730.5-201ENST00000530288 346 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AP002472.1-201ENST00000577490 586 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AC099522.2-201ENST00000607001 744 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 AL136982.4-201ENST00000437689 1740 ntBASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM49D1C9J1S8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 MYO15B-237ENST00000642007 4893 ntBASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 RPS8P6-201ENST00000426177 609 ntBASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 AC074386.1-202ENST00000463561 864 ntBASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM49D1C9J1S8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 AL645939.2-201ENST00000427340 991 ntBASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 AC007967.2-201ENST00000432613 625 ntBASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM49D1C9J1S8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms