Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TVP23AA6NH52 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TVP23AA6NH52 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TVP23AA6NH52 AL136982.4-201ENST00000437689 1740 ntBASIC14.18□□□□□ -0.14
TVP23AA6NH52 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TVP23AA6NH52 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TVP23AA6NH52 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TVP23AA6NH52 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SPDYE11-202ENST00000450699 704 ntBASIC14.17□□□□□ -0.14
TVP23AA6NH52 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC243562.1-201ENST00000560672 389 ntBASIC14.17□□□□□ -0.14
TVP23AA6NH52 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SPDYE9P-201ENST00000570642 692 ntBASIC14.17□□□□□ -0.14
TVP23AA6NH52 MIR4313-201ENST00000580760 101 ntBASIC14.17□□□□□ -0.14
TVP23AA6NH52 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 SPDYE10P-202ENST00000612005 668 ntBASIC14.17□□□□□ -0.14
TVP23AA6NH52 SPDYE8P-202ENST00000612377 668 ntBASIC14.17□□□□□ -0.14
TVP23AA6NH52 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TVP23AA6NH52 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.17□□□□□ -0.14
TVP23AA6NH52 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TVP23AA6NH52 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TVP23AA6NH52 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms