Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.58■□□□□ 0.56
PTPDC1A2A3K4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 AC090616.6-203ENST00000579186 1945 ntBASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 AC005034.1-201ENST00000426657 489 ntBASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 SPTLC1P1-201ENST00000447199 261 ntBASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPDC1A2A3K4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 DBET-201ENST00000630918 3363 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AL596257.1-201ENST00000641463 2694 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AL512361.1-201ENST00000554200 418 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AL450472.2-201ENST00000603663 1156 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AC012645.4-201ENST00000610691 1061 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 AC004840.1-201ENST00000636359 365 ntBASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPDC1A2A3K4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPDC1A2A3K4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms