Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 AC005912.2-201ENST00000619492 2400 ntBASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AC127383.1-201ENST00000444697 1800 ntBASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 KRT18P34-201ENST00000488218 1270 ntBASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 MIR1199-201ENST00000621445 119 ntBASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AC018892.3-201ENST00000623986 2499 ntBASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV18A0A075B6X5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRAV18A0A075B6X5 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRAV18A0A075B6X5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AL589702.1-201ENST00000641229 1509 ntBASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 KRT18P31-201ENST00000506277 1292 ntBASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AL031432.2-201ENST00000566714 459 ntBASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AL928711.1-201ENST00000570165 459 ntBASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 OR7E47P-204ENST00000575924 449 ntBASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV18A0A075B6X5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms