Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC073347.1-201ENST00000421633 2643 ntBASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
HLA-DRB4X5D2U9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AC254562.1-201ENST00000417586 456 ntBASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AP006288.1-201ENST00000446065 395 ntBASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AC243562.2-201ENST00000561247 970 ntBASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 RARRES2P9-201ENST00000565168 469 ntBASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 AC013268.4-201ENST00000637413 2228 ntBASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HLA-DRB4X5D2U9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AC138035.3-201ENST00000622706 2791 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AP3S2-216ENST00000617003 1561 ntBASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.97□□□□□ -0.49
HLA-DRB4X5D2U9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms