Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 IGLL3P-201ENST00000412472 434 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 HCG4-201ENST00000418983 998 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 REXO1L3P-201ENST00000622202 1288 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 ST20-AS1-201ENST00000560255 4223 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 CICP20-201ENST00000443330 2801 ntBASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 KRT18P2-201ENST00000447938 1258 ntBASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 AC107918.2-201ENST00000530817 355 ntBASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 AL645728.2-201ENST00000641974 660 ntBASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 AC012569.1-201ENST00000591191 1524 ntBASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.21■□□□□ 0.51
R3HCC1Q9Y3T6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AC023274.1-201ENST00000418278 595 ntBASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 RHOQP3-201ENST00000437982 621 ntBASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AL031432.2-201ENST00000566714 459 ntBASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AL928711.1-201ENST00000570165 459 ntBASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms