Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSX2IPQ9Y2D8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 AL592424.1-201ENST00000563624 1536 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 BOLA2P3-201ENST00000404566 256 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 RPS2P32-201ENST00000439199 892 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 AC234783.1-201ENST00000441761 496 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 EEF1DP4-201ENST00000446006 880 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 AC092552.1-201ENST00000547243 906 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 AC036164.1-201ENST00000570544 333 ntBASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSX2IPQ9Y2D8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSX2IPQ9Y2D8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 AC008741.2-201ENST00000612792 3115 ntBASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 MIR1909-201ENST00000411312 80 ntBASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 AC098850.1-201ENST00000419919 790 ntBASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 RN7SL399P-201ENST00000471648 279 ntBASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.01■□□□□ 0.31
SSX2IPQ9Y2D8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms