Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 OS9-203ENST00000389142 2457 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 POM121L6P-201ENST00000441186 1826 ntBASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 HES2-205ENST00000487437 968 ntTSL 3 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 CICP18-201ENST00000406017 2812 ntBASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDC42SE1Q9NRR8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 POU2F2-201ENST00000342301 3730 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 CYP21A1P-202ENST00000354927 1481 ntBASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CDC42SE1Q9NRR8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms