Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AP001005.1-201ENST00000571755 1248 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 RN7SL510P-201ENST00000581311 263 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AC068137.2-201ENST00000605408 478 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 Z83851.2-201ENST00000609564 659 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL031008.1-201ENST00000619963 541 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AC013726.1-201ENST00000563747 2285 ntBASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE2Q9NRR3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AC074386.1-202ENST00000463561 864 ntBASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AL138918.1-201ENST00000568306 659 ntBASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AC104692.2-201ENST00000603054 253 ntBASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AL450472.2-201ENST00000603663 1156 ntBASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms