Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 HNRNPDP1-201ENST00000439535 754 ntBASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AC092910.1-201ENST00000482027 1129 ntBASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AC096734.2-201ENST00000562054 433 ntBASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 FAM215A-202ENST00000632077 792 ntBASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 UNC93B6-202ENST00000528242 690 ntBASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AC012640.2-201ENST00000561606 901 ntBASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AL009183.1-201ENST00000603760 355 ntBASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AC023141.13-201ENST00000604991 943 ntBASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AC011477.6-201ENST00000604980 1927 ntBASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AC007292.2-201ENST00000593524 1812 ntBASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCDHB16Q9NRJ7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms