Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 AP001269.4-201ENST00000609611 512 ntBASIC14.47□□□□□ -0.09
HMG20AQ9NP66 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HMG20AQ9NP66 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 PRYP5-201ENST00000451909 266 ntBASIC14.46□□□□□ -0.09
HMG20AQ9NP66 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 FOSL1P1-201ENST00000511041 816 ntBASIC14.46□□□□□ -0.09
HMG20AQ9NP66 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMG20AQ9NP66 AC105250.1-201ENST00000509378 2057 ntBASIC14.46□□□□□ -0.09
HMG20AQ9NP66 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 AC136759.1-202ENST00000530858 2194 ntBASIC14.46□□□□□ -0.1
HMG20AQ9NP66 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 AC140479.7-201ENST00000636301 2332 ntBASIC14.46□□□□□ -0.1
HMG20AQ9NP66 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMG20AQ9NP66 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 LINC01230-201ENST00000625222 3017 ntBASIC14.45□□□□□ -0.1
HMG20AQ9NP66 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 AC106795.1-205ENST00000512851 1056 ntBASIC14.45□□□□□ -0.1
HMG20AQ9NP66 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms