Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD248Q9HCU0 PPT1-215ENST00000641471 2368 ntBASIC16.71■□□□□ 0.26
CD248Q9HCU0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD248Q9HCU0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC106881.1-201ENST00000605849 3329 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 PKD1P5-201ENST00000532415 10291 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC015656.1-201ENST00000624209 3578 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC073439.1-201ENST00000624121 1774 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC027369.6-201ENST00000525520 931 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC005225.4-201ENST00000557330 545 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 TUBB8P12-201ENST00000308911 1335 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 TUBB7P-202ENST00000428444 1305 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.7■□□□□ 0.26
CD248Q9HCU0 TUBB8P7-204ENST00000567960 1332 ntBASIC16.7■□□□□ 0.26
CD248Q9HCU0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD248Q9HCU0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 FAM220BP-201ENST00000377689 816 ntBASIC16.69■□□□□ 0.26
CD248Q9HCU0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 CRB3P1-201ENST00000449338 276 ntBASIC16.69■□□□□ 0.26
CD248Q9HCU0 AL512638.1-201ENST00000457493 794 ntBASIC16.69■□□□□ 0.26
CD248Q9HCU0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 HLA-V-204ENST00000476601 1289 ntBASIC16.69■□□□□ 0.26
CD248Q9HCU0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 BANF1P1-201ENST00000553684 263 ntBASIC16.69■□□□□ 0.26
CD248Q9HCU0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 AL035252.4-201ENST00000624174 288 ntBASIC16.69■□□□□ 0.26
CD248Q9HCU0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD248Q9HCU0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CD248Q9HCU0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms