Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 SLC7A15P-201ENST00000424028 1363 ntBASIC18.58■□□□□ 0.57
RNF41Q9H4P4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF41Q9H4P4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AC087499.6-201ENST00000411576 835 ntBASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AC138761.1-201ENST00000584393 385 ntBASIC18.58■□□□□ 0.56
RNF41Q9H4P4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 AC007950.2-201ENST00000615045 2347 ntBASIC18.58■□□□□ 0.56
RNF41Q9H4P4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.58■□□□□ 0.56
RNF41Q9H4P4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 CICP13-201ENST00000422015 2789 ntBASIC18.58■□□□□ 0.56
RNF41Q9H4P4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RNF41Q9H4P4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 AC036164.1-201ENST00000570544 333 ntBASIC18.57■□□□□ 0.56
RNF41Q9H4P4 AC015910.1-201ENST00000579400 975 ntBASIC18.57■□□□□ 0.56
RNF41Q9H4P4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 AC127383.1-201ENST00000444697 1800 ntBASIC18.57■□□□□ 0.56
RNF41Q9H4P4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF41Q9H4P4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 AL121723.1-201ENST00000445194 1519 ntBASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 AC092127.1-201ENST00000567093 3455 ntBASIC18.56■□□□□ 0.56
RNF41Q9H4P4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF41Q9H4P4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF41Q9H4P4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms