Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 IGLL3P-201ENST00000412472 434 ntBASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 GPX1P2-201ENST00000429271 606 ntBASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AC140658.5-201ENST00000438532 169 ntBASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AL031008.1-201ENST00000619963 541 ntBASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AL161645.1-201ENST00000622716 1255 ntBASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AC010507.1-201ENST00000633895 436 ntBASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 AC112693.3-201ENST00000624819 1983 ntBASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COMMD4Q9H0A8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 AC024267.1-201ENST00000582320 895 ntBASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 AC104692.2-201ENST00000603054 253 ntBASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
COMMD4Q9H0A8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.01□□□□□ -0.17
COMMD4Q9H0A8 LINC01101-201ENST00000622953 1884 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms