Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 BX640514.1-201ENST00000583223 1918 ntBASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GABARAPL3Q9BY60 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AC096734.2-201ENST00000562054 433 ntBASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 AC010507.1-201ENST00000633895 436 ntBASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
GABARAPL3Q9BY60 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 PHKG1P2-201ENST00000457537 863 ntBASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 PRELID1P1-202ENST00000567272 903 ntBASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.37□□□□□ -0.11
GABARAPL3Q9BY60 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms