Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RPL3P5-201ENST00000441645 1232 ntBASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 DPY19L2P5-201ENST00000456300 331 ntBASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 AC022966.2-201ENST00000587434 367 ntBASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 AC016396.2-201ENST00000562575 1417 ntBASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COL25A1Q9BXS0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 LINC01815-202ENST00000641468 1409 ntBASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 DUTP3-201ENST00000450025 415 ntBASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 CYP4F36P-201ENST00000589193 186 ntBASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AC007326.1-201ENST00000604539 458 ntBASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AC002044.2-201ENST00000624910 970 ntBASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.55■□□□□ 0.08
COL25A1Q9BXS0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AC021305.1-201ENST00000520656 1514 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 KRT18P9-201ENST00000604826 1300 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 HLA-DMA-203ENST00000395305 777 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 SCARNA12-201ENST00000459155 270 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AC006529.1-201ENST00000459978 637 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms