Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RARRES2P5-201ENST00000564013 466 ntBASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPAP1Q9BWH6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 RPS2P32-201ENST00000439199 892 ntBASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 AC138932.1-201ENST00000534164 6830 ntBASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 AL513477.1-201ENST00000602865 2407 ntBASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPAP1Q9BWH6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AC022532.1-201ENST00000624563 1728 ntBASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AC022210.1-201ENST00000449856 793 ntBASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AC119751.2-201ENST00000504529 210 ntBASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 MST1L-201ENST00000442552 2185 ntBASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RPAP1Q9BWH6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPAP1Q9BWH6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms