Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 AC092474.2-201ENST00000424288 719 ntBASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
THUMPD3Q9BV44 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 PMS2P7-201ENST00000506558 1336 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 MED15P5-201ENST00000423150 992 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 RNA5SP416-201ENST00000516838 111 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AC002347.1-201ENST00000569543 541 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AC140113.2-201ENST00000604370 208 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AC027601.4-201ENST00000611259 610 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 TCAF2P1-201ENST00000291129 2421 ntBASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.19■□□□□ 0.02
THUMPD3Q9BV44 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 AL591424.1-201ENST00000442569 1213 ntBASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 KRT18P3-201ENST00000451602 1288 ntBASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 KRT19P2-202ENST00000557173 1012 ntBASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
THUMPD3Q9BV44 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms