Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FAM86GP-201ENST00000448322 971 ntBASIC18.7■□□□□ 0.58
NEK1Q96PY6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 AC027369.6-201ENST00000525520 931 ntBASIC18.7■□□□□ 0.58
NEK1Q96PY6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 AL512361.1-201ENST00000554200 418 ntBASIC18.7■□□□□ 0.58
NEK1Q96PY6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 AC025048.3-201ENST00000590609 569 ntBASIC18.7■□□□□ 0.58
NEK1Q96PY6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 AC005702.4-201ENST00000618393 416 ntBASIC18.7■□□□□ 0.58
NEK1Q96PY6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 AC144831.1-201ENST00000573312 2656 ntBASIC18.7■□□□□ 0.58
NEK1Q96PY6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 AC092580.3-201ENST00000430932 139 ntBASIC18.69■□□□□ 0.58
NEK1Q96PY6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.69■□□□□ 0.58
NEK1Q96PY6 Z97205.2-201ENST00000564697 1639 ntBASIC18.69■□□□□ 0.58
NEK1Q96PY6 AC112693.3-201ENST00000624819 1983 ntBASIC18.69■□□□□ 0.58
NEK1Q96PY6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.69■□□□□ 0.58
NEK1Q96PY6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEK1Q96PY6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 AC097493.3-201ENST00000509725 367 ntBASIC18.68■□□□□ 0.58
NEK1Q96PY6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEK1Q96PY6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEK1Q96PY6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms