Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC015922.1-201ENST00000421102 1152 ntBASIC16.28■□□□□ 0.2
RPRD1AQ96P16 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 LINC02084-201ENST00000606069 1096 ntBASIC16.28■□□□□ 0.2
RPRD1AQ96P16 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.28■□□□□ 0.2
RPRD1AQ96P16 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 KRT18P64-201ENST00000434946 1219 ntBASIC16.27■□□□□ 0.2
RPRD1AQ96P16 MEIS3P1-201ENST00000495167 958 ntBASIC16.27■□□□□ 0.2
RPRD1AQ96P16 AC093004.1-201ENST00000508850 424 ntBASIC16.27■□□□□ 0.2
RPRD1AQ96P16 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPRD1AQ96P16 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPRD1AQ96P16 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RPRD1AQ96P16 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RPRD1AQ96P16 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.27■□□□□ 0.19
RPRD1AQ96P16 TNRC18P3-201ENST00000441896 2691 ntBASIC16.27■□□□□ 0.19
RPRD1AQ96P16 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPRD1AQ96P16 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RPRD1AQ96P16 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AL513477.1-201ENST00000602865 2407 ntBASIC16.26■□□□□ 0.19
RPRD1AQ96P16 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AP005117.1-202ENST00000581724 1908 ntBASIC16.26■□□□□ 0.19
RPRD1AQ96P16 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AC023310.3-201ENST00000557027 670 ntBASIC16.26■□□□□ 0.19
RPRD1AQ96P16 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AC100756.1-201ENST00000562736 682 ntBASIC16.26■□□□□ 0.19
RPRD1AQ96P16 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AC138749.3-201ENST00000567691 622 ntBASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.26■□□□□ 0.19
RPRD1AQ96P16 AC116165.1-201ENST00000611806 668 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms