Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 SOCS2P1-201ENST00000417727 557 ntBASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC243562.2-201ENST00000561247 970 ntBASIC15.07■□□□□ 0
SLC46A1Q96NT5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SLC46A1Q96NT5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC46A1Q96NT5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 TOMM22P5-201ENST00000416399 439 ntBASIC15.06■□□□□ 0
SLC46A1Q96NT5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.06■□□□□ 0
SLC46A1Q96NT5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC079316.1-201ENST00000548397 411 ntBASIC15.06■□□□□ 0
SLC46A1Q96NT5 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC009486.1-201ENST00000569860 813 ntBASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC124283.3-201ENST00000570869 594 ntBASIC15.06■□□□□ 0
SLC46A1Q96NT5 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.06■□□□□ 0
SLC46A1Q96NT5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC46A1Q96NT5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.05■□□□□ 0
SLC46A1Q96NT5 INTS4P2-202ENST00000614726 2019 ntBASIC15.05■□□□□ 0
SLC46A1Q96NT5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
SLC46A1Q96NT5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC46A1Q96NT5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms