Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 AC073439.1-201ENST00000624121 1774 ntBASIC13.64□□□□□ -0.23
CMTM3Q96MX0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 KRT18P27-201ENST00000427733 1299 ntBASIC13.64□□□□□ -0.23
CMTM3Q96MX0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ACTL9-202ENST00000612068 1252 ntBASIC13.64□□□□□ -0.23
CMTM3Q96MX0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 AL359881.3-201ENST00000602640 1721 ntBASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CMTM3Q96MX0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AC007686.3-201ENST00000619017 3487 ntBASIC13.63□□□□□ -0.23
CMTM3Q96MX0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AC073621.1-201ENST00000392730 636 ntBASIC13.63□□□□□ -0.23
CMTM3Q96MX0 MRPL20P1-201ENST00000400819 433 ntBASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AL078644.1-201ENST00000609881 752 ntBASIC13.63□□□□□ -0.23
CMTM3Q96MX0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 AC107918.4-202ENST00000641623 219 ntBASIC13.63□□□□□ -0.23
CMTM3Q96MX0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CMTM3Q96MX0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMTM3Q96MX0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CMTM3Q96MX0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMTM3Q96MX0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMTM3Q96MX0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CMTM3Q96MX0 BNIP3P1-202ENST00000550043 1585 ntBASIC13.62□□□□□ -0.23
CMTM3Q96MX0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMTM3Q96MX0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms