Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RPGRQ92834 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPGRQ92834 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.3■□□□□ 0.68
RPGRQ92834 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.3■□□□□ 0.68
RPGRQ92834 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.3■□□□□ 0.68
RPGRQ92834 RNA5SP486-201ENST00000515961 83 ntBASIC19.3■□□□□ 0.68
RPGRQ92834 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.3■□□□□ 0.68
RPGRQ92834 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.3■□□□□ 0.68
RPGRQ92834 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.3■□□□□ 0.68
RPGRQ92834 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPGRQ92834 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPGRQ92834 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPGRQ92834 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RPGRQ92834 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
RPGRQ92834 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.29■□□□□ 0.68
RPGRQ92834 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.29■□□□□ 0.68
RPGRQ92834 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPGRQ92834 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.29■□□□□ 0.68
RPGRQ92834 CALR4P-201ENST00000431943 946 ntBASIC19.29■□□□□ 0.68
RPGRQ92834 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 MTX1P1-201ENST00000440904 838 ntBASIC19.29■□□□□ 0.68
RPGRQ92834 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 AL591846.1-201ENST00000451736 433 ntBASIC19.29■□□□□ 0.68
RPGRQ92834 AL008638.5-201ENST00000623814 1298 ntBASIC19.29■□□□□ 0.68
RPGRQ92834 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.29■□□□□ 0.68
RPGRQ92834 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.29■□□□□ 0.68
RPGRQ92834 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPGRQ92834 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.29■□□□□ 0.68
RPGRQ92834 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
RPGRQ92834 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPGRQ92834 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.28■□□□□ 0.68
RPGRQ92834 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.28■□□□□ 0.68
RPGRQ92834 HOMER2P2-201ENST00000451621 847 ntBASIC19.28■□□□□ 0.68
RPGRQ92834 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.28■□□□□ 0.68
RPGRQ92834 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.28■□□□□ 0.68
RPGRQ92834 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.28■□□□□ 0.68
RPGRQ92834 AC005695.3-201ENST00000614522 232 ntBASIC19.28■□□□□ 0.68
RPGRQ92834 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.28■□□□□ 0.68
RPGRQ92834 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPGRQ92834 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RPGRQ92834 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.27■□□□□ 0.68
RPGRQ92834 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms