Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SSR4P1-201ENST00000415143 412 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AL773545.2-201ENST00000442149 472 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC092910.2-201ENST00000491262 348 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 LDHAL6CP-201ENST00000502352 1142 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 GOLGA2P10-201ENST00000550961 817 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC009053.2-201ENST00000563701 2365 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC022447.5-201ENST00000504817 392 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC114947.1-202ENST00000514136 344 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 RN7SL322P-201ENST00000583519 299 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 APOC1-209ENST00000592885 562 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 AC023051.2-201ENST00000541141 460 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 DUX4L46-201ENST00000566845 751 ntBASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SYNE2Q8WXH0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 Z69706.1-201ENST00000595428 547 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL118522.1-201ENST00000611368 560 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL136295.7-201ENST00000619226 1200 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AC100756.2-201ENST00000569537 736 ntBASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SYNE2Q8WXH0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms