Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 CICP13-201ENST00000422015 2789 ntBASIC16.3■□□□□ 0.2
SCG3Q8WXD2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCG3Q8WXD2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 GPS2P2-201ENST00000430745 888 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AC055876.3-201ENST00000431496 288 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ALG1L8P-201ENST00000533887 760 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AP000842.3-202ENST00000569238 1080 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AC005498.2-205ENST00000593218 784 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 AC138649.4-201ENST00000612222 287 ntBASIC16.29■□□□□ 0.2
SCG3Q8WXD2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCG3Q8WXD2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AC010491.1-201ENST00000563101 2797 ntBASIC16.28■□□□□ 0.2
SCG3Q8WXD2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 MIR346-201ENST00000362234 95 ntBASIC16.28■□□□□ 0.2
SCG3Q8WXD2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AC140878.1-201ENST00000565277 250 ntBASIC16.28■□□□□ 0.2
SCG3Q8WXD2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 MIR6080-201ENST00000617359 66 ntBASIC16.28■□□□□ 0.2
SCG3Q8WXD2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 SNX18-202ENST00000343017 3140 ntBASIC16.28■□□□□ 0.2
SCG3Q8WXD2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCG3Q8WXD2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.27■□□□□ 0.2
SCG3Q8WXD2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms