Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.1■□□□□ 0.17
PTCD2Q8WV60 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AC068313.1-201ENST00000604028 1008 ntBASIC16.1■□□□□ 0.17
PTCD2Q8WV60 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 SPDYE12P-201ENST00000618416 771 ntBASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AL390754.1-201ENST00000619088 582 ntBASIC16.1■□□□□ 0.17
PTCD2Q8WV60 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PTCD2Q8WV60 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 TCAF2P1-201ENST00000291129 2421 ntBASIC16.09■□□□□ 0.17
PTCD2Q8WV60 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 SETP12-201ENST00000514068 805 ntBASIC16.09■□□□□ 0.17
PTCD2Q8WV60 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AL031058.1-201ENST00000561592 888 ntBASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AC090953.1-201ENST00000604305 1092 ntBASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AC007967.4-201ENST00000614700 386 ntBASIC16.09■□□□□ 0.17
PTCD2Q8WV60 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 CYP4F24P-201ENST00000586049 1580 ntBASIC16.09■□□□□ 0.17
PTCD2Q8WV60 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.09■□□□□ 0.17
PTCD2Q8WV60 AL136982.4-201ENST00000437689 1740 ntBASIC16.08■□□□□ 0.17
PTCD2Q8WV60 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTCD2Q8WV60 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PTCD2Q8WV60 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.08■□□□□ 0.17
PTCD2Q8WV60 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTCD2Q8WV60 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms