Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 BCRP1-201ENST00000444246 691 ntBASIC16.73■□□□□ 0.27
UBA3Q8TBC4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 ZNF890P-202ENST00000530367 1156 ntBASIC16.73■□□□□ 0.27
UBA3Q8TBC4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 AC135586.1-201ENST00000539323 574 ntBASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.72■□□□□ 0.27
UBA3Q8TBC4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 SPCS2P1-201ENST00000561636 679 ntBASIC16.72■□□□□ 0.27
UBA3Q8TBC4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 AC011467.4-201ENST00000594891 528 ntBASIC16.72■□□□□ 0.27
UBA3Q8TBC4 AC074044.1-201ENST00000609673 707 ntBASIC16.72■□□□□ 0.27
UBA3Q8TBC4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBA3Q8TBC4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.71■□□□□ 0.27
UBA3Q8TBC4 AL589987.1-201ENST00000453380 819 ntBASIC16.71■□□□□ 0.27
UBA3Q8TBC4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 AL096865.1-201ENST00000606796 927 ntBASIC16.71■□□□□ 0.27
UBA3Q8TBC4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.71■□□□□ 0.27
UBA3Q8TBC4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
UBA3Q8TBC4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBA3Q8TBC4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBA3Q8TBC4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBA3Q8TBC4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms