Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 AC025181.2-201ENST00000606994 802 ntBASIC19.61■□□□□ 0.73
LINS1Q8NG48 AC005252.2-201ENST00000624630 1141 ntBASIC19.61■□□□□ 0.73
LINS1Q8NG48 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINS1Q8NG48 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LINS1Q8NG48 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 AC084364.1-201ENST00000551967 1556 ntBASIC19.6■□□□□ 0.73
LINS1Q8NG48 PRAL-201ENST00000624952 3286 ntBASIC19.6■□□□□ 0.73
LINS1Q8NG48 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.6■□□□□ 0.73
LINS1Q8NG48 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINS1Q8NG48 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 AC112492.5-201ENST00000421897 457 ntBASIC19.59■□□□□ 0.73
LINS1Q8NG48 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 GPR53P-205ENST00000457298 1084 ntBASIC19.59■□□□□ 0.73
LINS1Q8NG48 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LINS1Q8NG48 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LINS1Q8NG48 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms