Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AL513210.1-201ENST00000629608 234 ntBASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF439Q8NDP4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 MIR4469-201ENST00000583919 79 ntBASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 UXT-AS1-201ENST00000590504 1525 ntBASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF439Q8NDP4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 AP3S2-216ENST00000617003 1561 ntBASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF439Q8NDP4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms