Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB42Q8N4Z0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC010336.2-201ENST00000564226 506 ntBASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC005498.2-205ENST00000593218 784 ntBASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB42Q8N4Z0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AC136604.1-201ENST00000418535 575 ntBASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 HIST3H2BA-201ENST00000436555 524 ntBASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 TIMM17BP1-201ENST00000545713 516 ntBASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AL512361.1-201ENST00000554200 418 ntBASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB42Q8N4Z0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms