Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCUBE3Q8IX30 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.63■□□□□ 0.25
SCUBE3Q8IX30 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SCUBE3Q8IX30 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SCUBE3Q8IX30 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 AC005225.4-201ENST00000557330 545 ntBASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SCUBE3Q8IX30 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 BTBD7P1-201ENST00000447253 1453 ntBASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 AC009090.5-201ENST00000624886 2285 ntBASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 KRT18P64-201ENST00000434946 1219 ntBASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 AC135586.1-201ENST00000539323 574 ntBASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 AC074044.1-201ENST00000609673 707 ntBASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SCUBE3Q8IX30 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AC114501.2-201ENST00000439631 535 ntBASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 RPL13P2-201ENST00000440687 659 ntBASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms