Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 BX842568.4-201ENST00000421222 227 ntBASIC13.91□□□□□ -0.18
C11orf88Q6PI97 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 AC025062.2-201ENST00000605477 670 ntBASIC13.91□□□□□ -0.18
C11orf88Q6PI97 Z83851.2-201ENST00000609564 659 ntBASIC13.91□□□□□ -0.18
C11orf88Q6PI97 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
C11orf88Q6PI97 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AC007292.2-201ENST00000593524 1812 ntBASIC13.9□□□□□ -0.18
C11orf88Q6PI97 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 MIR1233-2-201ENST00000408138 82 ntBASIC13.9□□□□□ -0.18
C11orf88Q6PI97 MIR1233-1-201ENST00000408722 82 ntBASIC13.9□□□□□ -0.18
C11orf88Q6PI97 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 AL122018.1-201ENST00000446607 2310 ntBASIC13.9□□□□□ -0.18
C11orf88Q6PI97 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
C11orf88Q6PI97 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.9□□□□□ -0.19
C11orf88Q6PI97 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
C11orf88Q6PI97 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
C11orf88Q6PI97 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms