Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 MYCLP2-201ENST00000449268 967 ntBASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GIMAP3P-201ENST00000495150 836 ntBASIC14.3□□□□□ -0.12
RTL6Q6ICC9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 AC074044.1-201ENST00000609673 707 ntBASIC14.3□□□□□ -0.12
RTL6Q6ICC9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 AL691432.1-201ENST00000596308 1422 ntBASIC14.3□□□□□ -0.12
RTL6Q6ICC9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTL6Q6ICC9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ALOX12P2-203ENST00000570921 1945 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AL512384.1-201ENST00000406683 331 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AC098850.1-201ENST00000419919 790 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ARSEP1-201ENST00000420443 635 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ELK1P1-201ENST00000485699 580 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AC123567.1-201ENST00000548294 1261 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CTBP2P3-201ENST00000585629 1255 ntBASIC14.29□□□□□ -0.12
RTL6Q6ICC9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTL6Q6ICC9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 AC105917.1-201ENST00000506637 2539 ntBASIC14.28□□□□□ -0.12
RTL6Q6ICC9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RTL6Q6ICC9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 2430 ms