Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 HCG4-201ENST00000418983 998 ntBASIC14.96□□□□□ -0.01
LPCAT4Q643R3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 AL139424.1-201ENST00000607572 797 ntBASIC14.96□□□□□ -0.01
LPCAT4Q643R3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 DGCR9-201ENST00000609630 2415 ntBASIC14.96□□□□□ -0.01
LPCAT4Q643R3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
LPCAT4Q643R3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 AC089987.1-201ENST00000551654 2209 ntBASIC14.96□□□□□ -0.02
LPCAT4Q643R3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LPCAT4Q643R3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 MINOS1P3-201ENST00000457048 203 ntBASIC14.95□□□□□ -0.02
LPCAT4Q643R3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 AC097493.4-201ENST00000641197 219 ntBASIC14.95□□□□□ -0.02
LPCAT4Q643R3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LPCAT4Q643R3 PI4KAP1-204ENST00000612579 1703 ntBASIC14.95□□□□□ -0.02
LPCAT4Q643R3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LPCAT4Q643R3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms