Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 FAM207CP-201ENST00000443486 507 ntBASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC010336.2-201ENST00000564226 506 ntBASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC092364.2-202ENST00000597012 1073 ntBASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TTC39BQ5VTQ0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TTC39BQ5VTQ0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 MST1L-201ENST00000442552 2185 ntBASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AL512361.1-201ENST00000554200 418 ntBASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AC009118.2-201ENST00000613275 655 ntBASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TTC39BQ5VTQ0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms