Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ATPAF1Q5TC12 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ELL2P1-201ENST00000413990 1906 ntBASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ADH5P3-201ENST00000433842 1137 ntBASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ATPAF1Q5TC12 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TFAMP1-201ENST00000412727 736 ntBASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 RN7SL589P-201ENST00000481268 310 ntBASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
ATPAF1Q5TC12 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms