Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 BNIP3P1-202ENST00000550043 1585 ntBASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00242Q5T6M2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 AL691432.1-201ENST00000596308 1422 ntBASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 HNRNPDP1-201ENST00000439535 754 ntBASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TP73-AS1-207ENST00000624167 988 ntBASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 AC117500.6-201ENST00000624871 588 ntBASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00242Q5T6M2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 SBF1P1-201ENST00000444527 5631 ntBASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 GRK6P1-201ENST00000400595 1711 ntBASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AC018712.1-201ENST00000455767 687 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms