Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.66■■□□□ 1.06
CDCA8Q53HL2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 KRT8P22-201ENST00000562317 1415 ntBASIC21.65■■□□□ 1.06
CDCA8Q53HL2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SOCS2P1-201ENST00000417727 557 ntBASIC21.65■■□□□ 1.06
CDCA8Q53HL2 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.65■■□□□ 1.06
CDCA8Q53HL2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 AL359711.2-201ENST00000563105 872 ntBASIC21.65■■□□□ 1.06
CDCA8Q53HL2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDCA8Q53HL2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA8Q53HL2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA8Q53HL2 DRD5P1-201ENST00000456605 1438 ntBASIC21.64■■□□□ 1.06
CDCA8Q53HL2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA8Q53HL2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
CDCA8Q53HL2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDCA8Q53HL2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 GAPDHP40-201ENST00000505218 1006 ntBASIC21.64■■□□□ 1.05
CDCA8Q53HL2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 AC093813.1-201ENST00000605066 256 ntBASIC21.64■■□□□ 1.05
CDCA8Q53HL2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CDCA8Q53HL2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 DKFZP434H168-201ENST00000567381 1905 ntBASIC21.63■■□□□ 1.05
CDCA8Q53HL2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 C1QBPP1-201ENST00000400117 770 ntBASIC21.63■■□□□ 1.05
CDCA8Q53HL2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.63■■□□□ 1.05
CDCA8Q53HL2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms