Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BX539320.1-201ENST00000623759 877 ntBASIC18.75■□□□□ 0.59
PDS5AQ29RF7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.75■□□□□ 0.59
PDS5AQ29RF7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 RPL5P21-201ENST00000404620 815 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 FTH1P14-201ENST00000482930 551 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AC022188.1-201ENST00000620960 1664 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 PCDH8P1-201ENST00000428983 2773 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AL645937.2-201ENST00000396808 931 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AC104457.1-201ENST00000401024 814 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 ACTBP8-201ENST00000403258 1108 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 NUS1P3-201ENST00000423502 862 ntBASIC18.74■□□□□ 0.59
PDS5AQ29RF7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.74■□□□□ 0.59
PDS5AQ29RF7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDS5AQ29RF7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms