Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.88□□□□□ -0.19
TFF3Q07654 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.88□□□□□ -0.19
TFF3Q07654 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TFF3Q07654 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TFF3Q07654 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TFF3Q07654 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.88□□□□□ -0.19
TFF3Q07654 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.88□□□□□ -0.19
TFF3Q07654 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.88□□□□□ -0.19
TFF3Q07654 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.87□□□□□ -0.19
TFF3Q07654 SOCS2P1-201ENST00000417727 557 ntBASIC13.87□□□□□ -0.19
TFF3Q07654 AC134915.1-201ENST00000426461 574 ntBASIC13.87□□□□□ -0.19
TFF3Q07654 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.87□□□□□ -0.19
TFF3Q07654 RPL13AP25-201ENST00000484130 612 ntBASIC13.87□□□□□ -0.19
TFF3Q07654 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.87□□□□□ -0.19
TFF3Q07654 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.87□□□□□ -0.19
TFF3Q07654 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.87□□□□□ -0.19
TFF3Q07654 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.87□□□□□ -0.19
TFF3Q07654 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 BNIP3P1-202ENST00000550043 1585 ntBASIC13.87□□□□□ -0.19
TFF3Q07654 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.87□□□□□ -0.19
TFF3Q07654 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TFF3Q07654 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.87□□□□□ -0.19
TFF3Q07654 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 AC026691.1-201ENST00000602502 2017 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TFF3Q07654 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TFF3Q07654 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 AC006449.5-201ENST00000610658 2098 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TFF3Q07654 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TFF3Q07654 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 BRWD1P1-201ENST00000401091 371 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.86□□□□□ -0.19
TFF3Q07654 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 FAM21FP-201ENST00000426241 1131 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 KRT18P64-201ENST00000434946 1219 ntBASIC13.86□□□□□ -0.19
TFF3Q07654 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.86□□□□□ -0.19
TFF3Q07654 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TFF3Q07654 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms