Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HIST1H2BCP62807 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
HIST1H2BCP62807 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.9□□□□□ -0.51
HIST1H2BCP62807 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
HIST1H2BCP62807 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H2BCP62807 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
HIST1H2BCP62807 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AL353593.2-201ENST00000602529 1483 ntBASIC11.89□□□□□ -0.51
HIST1H2BCP62807 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 PEMT-206ENST00000435340 960 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 FDX2-206ENST00000492239 773 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CYGB-204ENST00000589342 815 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 DGCR10-201ENST00000609839 495 ntBASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AL023875.1-201ENST00000640777 796 ntBASIC11.89□□□□□ -0.51
HIST1H2BCP62807 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.89□□□□□ -0.51
HIST1H2BCP62807 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AL731571.1-201ENST00000617058 5428 ntBASIC11.89□□□□□ -0.51
HIST1H2BCP62807 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.89□□□□□ -0.51
HIST1H2BCP62807 DNM1P41-201ENST00000623634 3350 ntBASIC11.88□□□□□ -0.51
HIST1H2BCP62807 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms