Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42P60953 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CDC42P60953 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.52□□□□□ -0.08
CDC42P60953 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42P60953 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42P60953 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42P60953 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.52□□□□□ -0.08
CDC42P60953 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42P60953 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC42P60953 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC42P60953 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDC42P60953 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CDC42P60953 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 CXCL1P1-201ENST00000502804 216 ntBASIC14.52□□□□□ -0.09
CDC42P60953 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC42P60953 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC42P60953 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.52□□□□□ -0.09
CDC42P60953 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC42P60953 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC42P60953 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDC42P60953 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC42P60953 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 AC127383.1-201ENST00000444697 1800 ntBASIC14.52□□□□□ -0.09
CDC42P60953 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC42P60953 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 AL359258.3-201ENST00000622910 2331 ntBASIC14.52□□□□□ -0.09
CDC42P60953 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42P60953 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDC42P60953 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC42P60953 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.51□□□□□ -0.09
CDC42P60953 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC42P60953 AC002347.1-201ENST00000569543 541 ntBASIC14.51□□□□□ -0.09
CDC42P60953 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 OR7E47P-204ENST00000575924 449 ntBASIC14.51□□□□□ -0.09
CDC42P60953 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 AC005593.1-201ENST00000624894 515 ntBASIC14.51□□□□□ -0.09
CDC42P60953 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC42P60953 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 AC126335.2-201ENST00000623362 4637 ntBASIC14.51□□□□□ -0.09
CDC42P60953 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC42P60953 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDC42P60953 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42P60953 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC42P60953 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42P60953 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42P60953 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42P60953 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC42P60953 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC42P60953 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC42P60953 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42P60953 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42P60953 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC42P60953 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.5□□□□□ -0.09
CDC42P60953 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDC42P60953 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms