Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.92□□□□□ -0.18
DEFA3P59666 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.92□□□□□ -0.18
DEFA3P59666 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEFA3P59666 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA3P59666 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.92□□□□□ -0.18
DEFA3P59666 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.92□□□□□ -0.18
DEFA3P59666 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DEFA3P59666 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.92□□□□□ -0.18
DEFA3P59666 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA3P59666 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DEFA3P59666 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
DEFA3P59666 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DEFA3P59666 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.91□□□□□ -0.18
DEFA3P59666 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DEFA3P59666 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
DEFA3P59666 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA3P59666 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.91□□□□□ -0.18
DEFA3P59666 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.91□□□□□ -0.18
DEFA3P59666 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA3P59666 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA3P59666 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA3P59666 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA3P59666 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DEFA3P59666 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA3P59666 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
DEFA3P59666 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.91□□□□□ -0.18
DEFA3P59666 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DEFA3P59666 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA3P59666 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA3P59666 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA3P59666 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
DEFA3P59666 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA3P59666 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA3P59666 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 RPS2P55-201ENST00000397318 883 ntBASIC13.9□□□□□ -0.18
DEFA3P59666 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DEFA3P59666 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 SIGLEC30P-201ENST00000455569 941 ntBASIC13.9□□□□□ -0.18
DEFA3P59666 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.9□□□□□ -0.18
DEFA3P59666 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DEFA3P59666 AC073592.5-201ENST00000624854 528 ntBASIC13.9□□□□□ -0.18
DEFA3P59666 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.9□□□□□ -0.18
DEFA3P59666 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.9□□□□□ -0.18
DEFA3P59666 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DEFA3P59666 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms