Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN17P56750 TEX28P1-201ENST00000613479 1221 ntBASIC14.14□□□□□ -0.15
CLDN17P56750 TEX28P2-201ENST00000617764 1221 ntBASIC14.14□□□□□ -0.15
CLDN17P56750 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN17P56750 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN17P56750 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN17P56750 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN17P56750 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CLDN17P56750 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLDN17P56750 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLDN17P56750 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.13□□□□□ -0.15
CLDN17P56750 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN17P56750 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN17P56750 PMS2P2-201ENST00000425039 1128 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 HIST3H2BA-201ENST00000436555 524 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.13□□□□□ -0.15
CLDN17P56750 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN17P56750 AC097493.3-201ENST00000509725 367 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN17P56750 HNRNPUP1-201ENST00000554987 333 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CLDN17P56750 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.13□□□□□ -0.15
CLDN17P56750 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 AL158211.3-201ENST00000607385 239 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 AC093512.1-201ENST00000617969 520 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLDN17P56750 AL033527.5-202ENST00000641632 1098 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.13□□□□□ -0.15
CLDN17P56750 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 AC092127.1-201ENST00000567093 3455 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.13□□□□□ -0.15
CLDN17P56750 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLDN17P56750 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.13□□□□□ -0.15
CLDN17P56750 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN17P56750 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN17P56750 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 AC092850.2-201ENST00000623821 2697 ntBASIC14.12□□□□□ -0.15
CLDN17P56750 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN17P56750 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLDN17P56750 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN17P56750 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLDN17P56750 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms