Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 AL390755.1-201ENST00000623716 2027 ntBASIC13.82□□□□□ -0.2
CLDN12P56749 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN12P56749 AL589702.1-201ENST00000641229 1509 ntBASIC13.82□□□□□ -0.2
CLDN12P56749 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN12P56749 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDN12P56749 SAPCD2P3-201ENST00000455031 850 ntBASIC13.82□□□□□ -0.2
CLDN12P56749 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN12P56749 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN12P56749 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 AC005912.2-201ENST00000619492 2400 ntBASIC13.82□□□□□ -0.2
CLDN12P56749 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN12P56749 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN12P56749 FGD5P1-202ENST00000614866 2498 ntBASIC13.82□□□□□ -0.2
CLDN12P56749 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN12P56749 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 AC073439.1-201ENST00000624121 1774 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 AC127383.1-201ENST00000444697 1800 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN12P56749 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 KRT18P34-201ENST00000488218 1270 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN12P56749 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN12P56749 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN12P56749 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 AC008735.5-201ENST00000623544 497 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 AC005593.1-201ENST00000624894 515 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 AL645728.2-201ENST00000641974 660 ntBASIC13.81□□□□□ -0.2
CLDN12P56749 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN12P56749 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN12P56749 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN12P56749 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms