Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDH12P55289 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
CDH12P55289 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 MED15P5-201ENST00000423150 992 ntBASIC14.8□□□□□ -0.04
CDH12P55289 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.8□□□□□ -0.04
CDH12P55289 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.8□□□□□ -0.04
CDH12P55289 AL591424.1-201ENST00000442569 1213 ntBASIC14.8□□□□□ -0.04
CDH12P55289 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH12P55289 AC112191.1-201ENST00000523689 701 ntBASIC14.8□□□□□ -0.04
CDH12P55289 AC106730.1-201ENST00000566722 1090 ntBASIC14.8□□□□□ -0.04
CDH12P55289 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.8□□□□□ -0.04
CDH12P55289 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH12P55289 AC140113.2-201ENST00000604370 208 ntBASIC14.8□□□□□ -0.04
CDH12P55289 AC099522.2-201ENST00000607001 744 ntBASIC14.8□□□□□ -0.04
CDH12P55289 AC027601.4-201ENST00000611259 610 ntBASIC14.8□□□□□ -0.04
CDH12P55289 AC120114.3-201ENST00000611923 658 ntBASIC14.8□□□□□ -0.04
CDH12P55289 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH12P55289 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH12P55289 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDH12P55289 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.8□□□□□ -0.04
CDH12P55289 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH12P55289 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDH12P55289 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH12P55289 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH12P55289 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CDH12P55289 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDH12P55289 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CDH12P55289 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDH12P55289 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH12P55289 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 KRT18P3-201ENST00000451602 1288 ntBASIC14.79□□□□□ -0.04
CDH12P55289 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH12P55289 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CDH12P55289 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDH12P55289 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH12P55289 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH12P55289 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms